Basic Information
Locus ID:
gene.Cymno05g12870
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 20439707 | 20462378 | + | gene.Cymno05g12870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.58 | 105,669.09 Da | 40.35 | 96.96 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 623 | 889 | 3.74702E-91 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 66 | 3.4E-4 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 618 | 884 | 1.5E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 149 | 208 | 1.4E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 390 | 6.12E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 603 | 901 | 2.83E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 578 | 692 | 1.9E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 286 | 2.1E-60 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 693 | 904 | 3.2E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 414 | 9.0E-10 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 219 | 244 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 314 | 338 | 31.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 617 | 889 | 4.3E-41 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 267 | 292 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 147 | 170 | 22.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 617 | 889 | 39.580158 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 623 | 645 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 737 | 749 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_043697922.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Telopea speciosissima] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1D1XDA3 | Putative LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Anthurium amnicola OX=1678845 GN=At1g06840_9 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology