Basic Information
Locus ID:
gene.Cymno05g12860
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 20388295 | 20431830 | + | gene.Cymno05g12860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.08 | 104,230.07 Da | 44.02 | 94.58 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 624 | 890 | 3.37619E-98 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 75 | 4.0E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 619 | 885 | 4.9E-47 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 387 | 7.25E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 604 | 919 | 1.28E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 297 | 1.5E-63 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 298 | 400 | 5.6E-9 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 694 | 895 | 8.1E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 590 | 693 | 1.8E-34 | - |
| SMART | SM00220 | serkin_6 | 618 | 890 | 3.7E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 618 | 890 | 38.505974 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 738 | 750 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 624 | 646 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 922 | 941 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_043697922.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Telopea speciosissima] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9PJ94 | Putative LRR receptor-like serine/threonine-protein kinase OS=Zostera marina OX=29655 GN=ZOSMA_241G00370 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology