Basic Information
Locus ID:
gene.Cymno05g10290
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 18381765 | 18384447 | + | gene.Cymno05g10290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 30,217.57 Da | 46.88 | 77.86 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 196 | 252 | 2.52126E-11 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 196 | 260 | 1.3E-14 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 188 | 261 | 3.27E-15 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 174 | 266 | 2.4E-15 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 195 | 255 | 8.0E-11 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 196 | 263 | 12.674186 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 240 | 259 | - | IPR018253 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 71 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06778.1 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_010916661.1 | uncharacterized protein LOC105041393 [Elaeis guineensis] | 0 |
| Q9QYI4 | DnaJ homolog subfamily B member 12 OS=Mus musculus OX=10090 GN=Dnajb12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6I9QX28 | uncharacterized protein LOC105041393 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105041393 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology