Basic Information
Locus ID:
gene.Cymno05g09760
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
NAC domain transcription factor superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 17978462 | 17981261 | + | gene.Cymno05g09760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 51,237.96 Da | 58.52 | 68.75 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 59 | 195 | 5.3E-20 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 43 | 214 | 4.18E-39 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 67 | 219 | 3.7E-29 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 58 | 214 | 29.78706 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 277 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 270 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_008800750.2 | SUPPRESSOR OF GAMMA RESPONSE 1 isoform X2 [Phoenix dactylifera] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1Z030 | NAC domain-containing protein 8 OS=Anthurium amnicola OX=1678845 GN=NAC008_3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology