Basic Information
Locus ID:
gene.Cymno05g08900
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 17387434 | 17389584 | + | gene.Cymno05g08900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 22,470.04 Da | 25.68 | 99.85 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 7 | 183 | 1.3E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 192 | 4.99E-55 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 200 | 9.3E-57 | - |
| SMART | SM00220 | serkin_6 | 1 | 196 | 3.9E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 201 | 31.255234 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 86 | 98 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 80 | 98 | 5.2E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 151 | 173 | 5.2E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 43 | 56 | 5.2E-11 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57610.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_021981382.1 | probable serine/threonine-protein kinase DDB_G0281745 [Helianthus annuus] | 0 |
| A0A2R6XIK6 | RAF-like serine/threonine-protein kinase PRAF OS=Marchantia polymorpha OX=3197 GN=PRAF PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2M4R1 | Protein kinase domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS306591 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology