Basic Information
Locus ID:
gene.Cymno05g06360
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Type I inositol-1,4,5-trisphosphate 5-phosphatase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 12605987 | 12611590 | + | gene.Cymno05g06360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 125,293.83 Da | 45.16 | 75.47 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 625 | 972 | 5.91124E-103 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 630 | 963 | 6.3E-16 | IPR005135 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 245 | 602 | 3.48E-22 | IPR036322 |
| SUPERFAMILY | SSF56219 | DNase I-like | 603 | 994 | 1.02E-58 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 188 | 439 | 1.1E-8 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 484 | 606 | 1.7E-6 | IPR015943 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 607 | 1003 | 7.2E-101 | IPR036691 |
| SMART | SM00320 | WD40_4 | 481 | 519 | 160.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 234 | 269 | 88.0 | IPR001680 |
| SMART | SM00128 | i5p_5 | 623 | 978 | 1.3E-91 | IPR000300 |
| SMART | SM00320 | WD40_4 | 306 | 344 | 1.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 521 | 558 | 21.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 51 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_009385144.1 | PREDICTED: type I inositol polyphosphate 5-phosphatase 13-like [Musa acuminata subsp. malaccensis] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9PI45 | Type I inositol-1,4,5-trisphosphate 5-phosphatase OS=Zostera marina OX=29655 GN=ZOSMA_252G00210 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology