Basic Information
Locus ID:
gene.Cymno05g06170
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 6999591 | 7007916 | + | gene.Cymno05g06170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 109,151.41 Da | 48.20 | 83.91 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 147 | 459 | 6.7E-106 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 122 | 490 | 7.97E-112 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 117 | 471 | 1.7E-130 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 120 | 467 | 5.9E-142 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 122 | 459 | 111.811363 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 355 | 366 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 356 | 374 | 4.0E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 194 | 215 | 4.0E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 323 | 340 | 4.0E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 409 | 430 | 4.0E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 97 | - | - |
| Coils | Coil | Coil | 466 | 493 | - | - |
| Coils | Coil | Coil | 853 | 880 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17360.1 | phragmoplast orienting kinesin 1. PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_039128057.1 | kinesin-like protein KIN-12E isoform X1 [Dioscorea cayenensis subsp. rotundata] | 0 |
| B9FUF9 | Kinesin-like protein KIN-12E OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12E PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9PCD4 | Kinesin motor domain-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_291G00110 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology