Basic Information
Locus ID:
gene.Cymno05g05130
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Receptor-like cytosolic serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 4314237 | 4318803 | - | gene.Cymno05g05130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 54,408.97 Da | 52.53 | 83.02 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 178 | 438 | 3.5E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 160 | 464 | 3.1E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 145 | 250 | 1.2E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 252 | 457 | 1.7E-58 | - |
| SMART | SM00220 | serkin_6 | 175 | 439 | 1.2E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 175 | 447 | 37.318718 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 181 | 203 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 294 | 306 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18910.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_008790289.1 | receptor-like cytosolic serine/threonine-protein kinase RBK2 [Phoenix dactylifera] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3S3R313 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X1 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02291900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology