Basic Information
Locus ID:
gene.Cymno05g04460
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 3355337 | 3369876 | - | gene.Cymno05g04460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 85,736.23 Da | 54.98 | 72.85 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 125 | 226 | 4.34489E-13 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 493 | 739 | 9.19346E-128 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 487 | 738 | 1.6E-66 | IPR001245 |
| Pfam | PF00989 | PAS fold | 117 | 224 | 7.1E-12 | IPR013767 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 118 | 223 | 1.26E-19 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 461 | 737 | 1.09E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 565 | 769 | 2.2E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 480 | 564 | 3.4E-28 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 125 | 231 | 1.0E-22 | - |
| SMART | SM00091 | pas_2 | 116 | 183 | 1.5E-6 | IPR000014 |
| SMART | SM00220 | serkin_6 | 487 | 739 | 2.5E-55 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 118 | 226 | 2.6E-12 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 114 | 185 | 14.96421 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 487 | 748 | 42.152546 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 606 | 618 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 561 | 574 | 1.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 710 | 732 | 1.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 600 | 618 | 1.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 647 | 657 | 1.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 666 | 688 | 1.7E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 105 | - | - |
| Coils | Coil | Coil | 6 | 26 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_008809262.2 | probable serine/threonine-protein kinase roco5 isoform X1 [Phoenix dactylifera] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IR88 | RGS domain-containing serine/threonine-protein kinase A OS=Cocos nucifera OX=13894 GN=COCNU_12G003090 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology