Basic Information
Locus ID:
gene.Cymno04g16880
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 25268108 | 25273270 | - | gene.Cymno04g16880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 69,869.90 Da | 41.63 | 102.68 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 102 | 162 | 2.3E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 349 | 605 | 7.9E-23 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 75 | 8.8E-7 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 328 | 606 | 5.05E-38 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 187 | 2.32E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 212 | 3.6E-33 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 320 | 427 | 2.8E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 429 | 615 | 1.6E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 346 | 616 | 18.845581 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 267 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_008789160.1 | inactive receptor-like serine/threonine-protein kinase At2g40270 [Phoenix dactylifera] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9Q4P0 | Protein kinase family protein, putative, expressed OS=Zostera marina OX=29655 GN=ZOSMA_114G00890 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology