Basic Information
Locus ID:
gene.Cymno04g16440
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 24916469 | 24918826 | - | gene.Cymno04g16440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 84,987.57 Da | 39.69 | 79.59 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 483 | 757 | 5.54303E-91 | - |
| Pfam | PF00069 | Protein kinase domain | 478 | 690 | 6.0E-43 | IPR000719 |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 195 | 221 | 2.3E-5 | - |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 28 | 258 | 1.02E-24 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 457 | 756 | 2.43E-70 | IPR011009 |
| Gene3D | G3DSA:2.130.10.30 | - | 19 | 308 | 1.1E-23 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 558 | 782 | 1.3E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 438 | 557 | 4.1E-33 | - |
| SMART | SM00220 | serkin_6 | 477 | 760 | 8.0E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 477 | 760 | 35.905319 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 604 | 616 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 483 | 505 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 766 | 785 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 427 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_010920862.1 | putative serine/threonine-protein kinase-like protein CCR3 [Elaeis guineensis] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9R775 | putative serine/threonine-protein kinase-like protein CCR3 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105044610 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology