Basic Information
Locus ID:
gene.Cymno04g14410
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
translocase of chloroplast 159
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 23077696 | 23081976 | + | gene.Cymno04g14410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.66 | 146,986.91 Da | 39.39 | 85.05 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 689 | 936 | 3.09219E-116 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1079 | 1342 | 2.2E-122 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 720 | 854 | 9.3E-21 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 704 | 852 | 4.23E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 694 | 942 | 2.4E-54 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 600 | 1348 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 717 | 945 | 27.340572 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 618 | 645 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
| Coils | Coil | Coil | 380 | 400 | - | - |
| Coils | Coil | Coil | 1031 | 1058 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_038986708.1 | translocase of chloroplast 101, chloroplastic-like [Phoenix dactylifera] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B9ARV1 | translocase of chloroplast 101, chloroplastic-like OS=Phoenix dactylifera OX=42345 GN=LOC120112134 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology