Basic Information
Locus ID:
gene.Cymno04g13450
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 22179466 | 22186613 | - | gene.Cymno04g13450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 112,326.94 Da | 48.57 | 74.26 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00307 | Calponin homology (CH) domain | 42 | 159 | 8.6E-14 | IPR001715 |
| Pfam | PF00225 | Kinesin motor domain | 540 | 711 | 4.8E-60 | IPR001752 |
| Pfam | PF00225 | Kinesin motor domain | 417 | 535 | 1.3E-27 | IPR001752 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 43 | 173 | 4.59E-22 | IPR036872 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 411 | 744 | 4.52E-106 | IPR027417 |
| Gene3D | G3DSA:1.10.418.10 | - | 32 | 159 | 6.8E-25 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 357 | 539 | 1.1E-44 | IPR036961 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 540 | 750 | 7.6E-72 | IPR036961 |
| SMART | SM00033 | ch_5 | 42 | 157 | 6.2E-7 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 409 | 720 | 3.8E-131 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 411 | 712 | 102.449333 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 40 | 159 | 17.117649 | IPR001715 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 612 | 623 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 662 | 683 | 1.4E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 613 | 631 | 1.4E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 485 | 506 | 1.4E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 582 | 599 | 1.4E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 805 | 824 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 789 | 824 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 947 | 1011 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 790 | 804 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 969 | 990 | - | - |
| Coils | Coil | Coil | 719 | 739 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47500.2 | - | 0 |
| RefSeq | XP_008807759.2 | LOW QUALITY PROTEIN: kinesin-like protein KIN-14F [Phoenix dactylifera] | 0 |
| Q10MN5 | Kinesin-like protein KIN-14F OS=Oryza sativa subsp. japonica OX=39947 GN=KIN14F PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B7CWN2 | LOW QUALITY PROTEIN: kinesin-like protein KIN-14F OS=Phoenix dactylifera OX=42345 GN=LOC103720023 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology