Basic Information
Locus ID:
gene.Cymno04g13180
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
leucine-rich repeat receptor-like protein kinase At5g49770
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 21961101 | 21967147 | + | gene.Cymno04g13180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 101,643.65 Da | 36.28 | 87.63 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 248 | 304 | 1.8E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 751 | 859 | 1.8E-9 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 633 | 746 | 3.3E-19 | IPR001245 |
| SUPERFAMILY | SSF52075 | Outer arm dynein light chain 1 | 249 | 422 | 6.8E-18 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 616 | 879 | 1.2E-55 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 305 | 5.27E-46 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 751 | 869 | 6.1E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 707 | 750 | 1.2E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 189 | 2.2E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 287 | 9.4E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 430 | 1.3E-13 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 602 | 705 | 1.3E-32 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 630 | 865 | 17.813801 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 636 | 658 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 866 | 889 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 866 | 882 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_030501376.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Cannabis sativa] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0I659 | Putative leucine-rich repeat receptor-like protein kinase OS=Cocos nucifera OX=13894 GN=COCNU_04G005130 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology