Basic Information
Locus ID:
gene.Cymno04g12290
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 21343298 | 21344519 | + | gene.Cymno04g12290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 41,391.51 Da | 50.27 | 93.57 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 21 | 255 | 1.5E-36 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 288 | 7.69E-60 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 98 | 1.1E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 99 | 299 | 1.3E-44 | - |
| SMART | SM00220 | serkin_6 | 18 | 293 | 5.7E-15 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 292 | 30.138647 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 141 | 153 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 24 | 47 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G23170.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018679049.1 | PREDICTED: serine/threonine-protein kinase-like protein At5g23170 [Musa acuminata subsp. malaccensis] | 0 |
| Q9FMY3 | Serine/threonine-protein kinase-like protein At5g23170 OS=Arabidopsis thaliana OX=3702 GN=At5g23170 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9NWX0 | Kinase family protein OS=Zostera marina OX=29655 GN=ZOSMA_58G00030 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology