Basic Information
Locus ID:
gene.Cymno04g12010
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 21149165 | 21160203 | + | gene.Cymno04g12010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 34,730.07 Da | 35.22 | 97.49 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 295 | 3.6E-68 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 298 | 5.13E-94 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 89 | 4.1E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 91 | 302 | 3.2E-69 | - |
| SMART | SM00220 | serkin_6 | 4 | 295 | 6.9E-99 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 295 | 43.834492 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 132 | 144 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38620.2 | cyclin-dependent kinase B1;2. Encodes a member of a plant specific family of cyclin dependent kinases. | 0 |
| RefSeq | XP_043698863.1 | cyclin-dependent kinase B1-1 [Telopea speciosissima] | 0 |
| Q8L4P8 | Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKB1-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1U8BP31 | cyclin-dependent kinase B1-1 OS=Nelumbo nucifera OX=4432 GN=LOC104612945 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology