Basic Information
Locus ID:
gene.Cymno04g11230
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Short Name:
CAX2
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 20453224 | 20467958 | - | gene.Cymno04g11230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 51,508.79 Da | 39.99 | 115.92 | 0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 321 | 460 | 6.7E-19 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 131 | 286 | 1.4E-20 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 307 | 462 | 2.6E-19 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 160 | 299 | 6.1E-15 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 96 | 463 | 3.3E-123 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 112 | 463 | 4.8E-105 | IPR004798 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_009763210.1 | PREDICTED: vacuolar cation/proton exchanger 2-like [Nicotiana sylvestris] | 0 |
| Q5KQN0 | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0A0UY37 | Vacuolar cation/proton exchanger OS=Nicotiana rustica OX=4093 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology