Basic Information
Locus ID:
gene.Cymno04g11210
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 20416512 | 20447256 | + | gene.Cymno04g11210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 87,043.54 Da | 44.62 | 87.31 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 487 | 757 | 7.1E-41 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 121 | 161 | 4.1E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 235 | 294 | 2.2E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 465 | 757 | 1.66E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 121 | 329 | 5.67E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 449 | 561 | 4.7E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 120 | 338 | 4.0E-48 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 563 | 773 | 2.3E-51 | - |
| SMART | SM00369 | LRR_typ_2 | 188 | 216 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 281 | 303 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 233 | 256 | 12.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 484 | 760 | 33.050251 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 283 | 305 | 7.296117 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 359 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_026430071.1 | protein STRUBBELIG-RECEPTOR FAMILY 6-like [Papaver somniferum] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NP62 | Kinase OS=Zostera marina OX=29655 GN=ZOSMA_81G00850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology