Basic Information
Locus ID:
gene.Cymno04g10420
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 19824281 | 19827878 | + | gene.Cymno04g10420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 102,052.78 Da | 33.23 | 93.26 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 606 | 877 | 1.28437E-95 | - |
| Pfam | PF13855 | Leucine rich repeat | 397 | 434 | 8.7E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 335 | 371 | 1.4E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 604 | 872 | 7.8E-49 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 67 | 1.2E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 65 | 444 | 1.87E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 588 | 889 | 6.88E-79 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 333 | 459 | 7.9E-36 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 678 | 896 | 2.2E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 561 | 677 | 3.5E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 332 | 6.2E-72 | IPR032675 |
| SMART | SM00220 | serkin_6 | 600 | 878 | 6.9E-43 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 397 | 420 | 77.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 421 | 444 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 139 | 164 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 115 | 138 | 0.34 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 242 | 264 | 300.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 600 | 877 | 40.513004 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 725 | 737 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 606 | 628 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 487 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_008798481.1 | receptor protein kinase TMK1-like [Phoenix dactylifera] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PKZ7 | Putative Receptor protein kinase OS=Zostera marina OX=29655 GN=ZOSMA_20G00990 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology