Basic Information
Locus ID:
gene.Cymno04g09370
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 18998303 | 19012813 | - | gene.Cymno04g09370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.47 | 73,225.40 Da | 48.04 | 74.95 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 201 | 463 | 3.0043E-131 | - |
| Pfam | PF00069 | Protein kinase domain | 203 | 464 | 2.7E-71 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 496 | 645 | 3.82E-17 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 199 | 493 | 4.45E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 489 | 643 | 1.7E-19 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 482 | 573 | 1.7E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 291 | 476 | 3.0E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 204 | 290 | 1.8E-22 | - |
| SMART | SM00220 | serkin_6 | 202 | 464 | 1.2E-100 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 202 | 464 | 52.809582 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 506 | 541 | 10.022245 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 208 | 234 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 326 | 338 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 146 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 50 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_010916660.1 | CDPK-related kinase 5 [Elaeis guineensis] | 0 |
| P53681 | CDPK-related protein kinase OS=Daucus carota OX=4039 GN=CRK PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0I2G8 | CDPK-related kinase 5 OS=Cocos nucifera OX=13894 GN=COCNU_03G007540 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology