Basic Information
Locus ID:
gene.Cymno04g08770
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 18491595 | 18496341 | - | gene.Cymno04g08770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 55,939.93 Da | 50.17 | 111.39 | 0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 359 | 497 | 3.0E-17 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 170 | 325 | 8.3E-19 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 346 | 500 | 7.7E-17 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 197 | 338 | 3.5E-14 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 135 | 501 | 9.0E-105 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 156 | 501 | 2.0E-94 | IPR004798 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 39 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_043689562.1 | vacuolar cation/proton exchanger 3 [Telopea speciosissima] | 0 |
| Q6K1C4 | Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7N0TUH1 | Vacuolar cation/proton exchanger OS=Kalanchoe fedtschenkoi OX=63787 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology