Basic Information
Locus ID:
gene.Cymno04g08050
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
wall-associated receptor kinase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 17892184 | 17897111 | - | gene.Cymno04g08050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 34,131.50 Da | 26.74 | 82.26 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 113 | 198 | 1.5E-13 | IPR001245 |
| Pfam | PF03129 | Anticodon binding domain | 228 | 280 | 6.1E-6 | IPR004154 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 90 | 206 | 2.85E-25 | IPR011009 |
| SUPERFAMILY | SSF52954 | Class II aaRS ABD-related | 224 | 294 | 2.78E-12 | - |
| Gene3D | G3DSA:3.40.50.800 | - | 214 | 296 | 1.4E-16 | IPR036621 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 75 | 185 | 5.2E-29 | - |
| SMART | SM00219 | tyrkin_6 | 110 | 289 | 0.0028 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 110 | 296 | 13.276787 | IPR000719 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16150.1 | wall associated kinase-like 4. Encodes a cell-wall associated kinase like protein of the receptor-like kinase (RLK) superfamily. Likely involved in Arabidopsis root mineral responses to Zn2+, Cu2+, K+, Na+ and Ni+. | 0 |
| RefSeq | XP_044398459.1 | putative wall-associated receptor kinase-like 16 [Triticum aestivum] | 0 |
| A0A1D6E0S8 | Wall-associated receptor kinase 17 OS=Zea mays OX=4577 GN=WAK17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453LFR5 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg11681, Sbi_jg46725, Sbi_jg46728 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl31699, Sgl31712, Sgl36127, Sgl37001 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g08050 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_006304 |