Basic Information
Locus ID:
gene.Cymno04g06760
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 17010018 | 17026143 | + | gene.Cymno04g06760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.38 | 227,208.09 Da | 43.51 | 88.77 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 164 | 472 | 1.0E-105 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 139 | 503 | 3.91E-113 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 135 | 484 | 4.6E-132 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 137 | 480 | 6.7E-147 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 139 | 472 | 115.130501 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 368 | 379 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 422 | 443 | 1.0E-38 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 336 | 353 | 1.0E-38 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 369 | 387 | 1.0E-38 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 207 | 228 | 1.0E-38 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 91 | - | - |
| Coils | Coil | Coil | 1779 | 1799 | - | - |
| Coils | Coil | Coil | 1861 | 1895 | - | - |
| Coils | Coil | Coil | 1531 | 1558 | - | - |
| Coils | Coil | Coil | 1003 | 1037 | - | - |
| Coils | Coil | Coil | 1917 | 1937 | - | - |
| Coils | Coil | Coil | 1681 | 1708 | - | - |
| Coils | Coil | Coil | 1594 | 1656 | - | - |
| Coils | Coil | Coil | 1502 | 1522 | - | - |
| Coils | Coil | Coil | 1474 | 1494 | - | - |
| Coils | Coil | Coil | 858 | 885 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17360.1 | phragmoplast orienting kinesin 1. PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_020272888.1 | kinesin-like protein KIN-12E isoform X1 [Asparagus officinalis] | 0 |
| B9FUF9 | Kinesin-like protein KIN-12E OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12E PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9PCD4 | Kinesin motor domain-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_291G00110 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology