Basic Information
Locus ID:
gene.Cymno04g02930
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 9806376 | 9808334 | + | gene.Cymno04g02930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.69 | 13,016.02 Da | 51.45 | 86.69 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 6 | 93 | 2.04368E-46 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 6 | 115 | 2.8E-41 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 2 | 95 | 4.71E-26 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 100 | 7.6E-42 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 118 | 1.2E-48 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 7 | 73 | 10.309861 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24990.1 | Ubiquitin family protein. geranylgeranylated protein ATGP4 | 0 |
| RefSeq | XP_009383408.2 | PREDICTED: membrane-anchored ubiquitin-fold protein 3-like [Musa acuminata subsp. malaccensis] | 0 |
| Q9SW27 | Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MUB3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3S3MV34 | Membrane-anchored ubiquitin-fold protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00868300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology