Basic Information
Locus ID:
gene.Cymno04g02250
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 1983767 | 1987749 | + | gene.Cymno04g02250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 69,207.74 Da | 50.55 | 81.95 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 145 | 401 | 4.34157E-133 | - |
| CDD | cd00051 | EFh | 523 | 583 | 8.35899E-18 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 147 | 402 | 6.3E-73 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 525 | 583 | 2.7E-12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 450 | 508 | 1.1E-8 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 128 | 421 | 9.98E-83 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 430 | 598 | 1.11E-38 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 230 | 409 | 2.1E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 146 | 229 | 3.0E-27 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 410 | 587 | 8.9E-45 | - |
| SMART | SM00054 | efh_1 | 449 | 477 | 0.0053 | IPR002048 |
| SMART | SM00220 | serkin_6 | 144 | 402 | 1.2E-95 | IPR000719 |
| SMART | SM00054 | efh_1 | 558 | 586 | 4.9E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 522 | 550 | 0.13 | IPR002048 |
| SMART | SM00054 | efh_1 | 485 | 513 | 0.35 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 144 | 402 | 47.890953 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 445 | 480 | 14.624987 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 518 | 553 | 11.472807 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 554 | 589 | 12.616518 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 481 | 516 | 8.766953 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 150 | 173 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 531 | 543 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 494 | 506 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 567 | 579 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 458 | 470 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 264 | 276 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 69 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57530.1 | calcium-dependent protein kinase 32. Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro | 0 |
| RefSeq | XP_020107221.1 | calcium-dependent protein kinase 29-like isoform X1 [Ananas comosus] | 0 |
| Q2QVG8 | Calcium-dependent protein kinase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9PW60 | Calcium-dependent protein kinase OS=Zostera marina OX=29655 GN=ZOSMA_150G00220 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology