Basic Information
Locus ID:
gene.Cymno03g13600
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 27211056 | 27213262 | + | gene.Cymno03g13600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.39 | 21,993.12 Da | 49.36 | 73.33 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF19026 | HYPK UBA domain | 161 | 200 | 1.9E-12 | IPR044034 |
| Pfam | PF01849 | NAC domain | 63 | 118 | 4.2E-22 | IPR002715 |
| Gene3D | G3DSA:2.20.70.30 | - | 69 | 122 | 7.3E-31 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 162 | 199 | 2.0E-19 | - |
| SMART | SM01407 | NAC_2 | 63 | 119 | 4.0E-25 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 60 | 125 | 17.395691 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 47 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_020241973.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Asparagus officinalis] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8AGJ2 | nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Nelumbo nucifera OX=4432 GN=LOC104604183 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology