Basic Information
Locus ID:
gene.Cymno03g12440
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 26477024 | 26482378 | + | gene.Cymno03g12440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 68,695.94 Da | 46.65 | 84.13 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 158 | 420 | 3.52094E-124 | - |
| Pfam | PF00069 | Protein kinase domain | 159 | 421 | 1.7E-70 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 449 | 603 | 2.43E-14 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 157 | 452 | 1.08E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 439 | 600 | 1.8E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 152 | 248 | 1.3E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 249 | 438 | 9.3E-62 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 461 | 530 | 1.8E-17 | - |
| SMART | SM00220 | serkin_6 | 159 | 421 | 1.7E-100 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 159 | 421 | 51.594059 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 283 | 295 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 165 | 191 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 54 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_018673775.1 | PREDICTED: CDPK-related kinase 5-like [Musa acuminata subsp. malaccensis] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9P0J8 | Putative Calcium-dependent protein kinase OS=Zostera marina OX=29655 GN=ZOSMA_4G00090 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology