Basic Information
Locus ID:
gene.Cymno03g10730
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Casein Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 25196276 | 25212246 | - | gene.Cymno03g10730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 77,048.88 Da | 47.40 | 71.90 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14016 | STKc_CK1 | 124 | 399 | 9.14258E-132 | - |
| Pfam | PF00069 | Protein kinase domain | 124 | 382 | 1.1E-17 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 124 | 408 | 4.78E-59 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 97 | 444 | 6.6E-82 | - |
| SMART | SM00220 | serkin_6 | 124 | 422 | 4.3E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 124 | 403 | 23.863152 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 250 | 262 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 130 | 162 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 28 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13670.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_010257513.1 | PREDICTED: casein kinase 1-like protein HD16 [Nelumbo nucifera] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7ZT66 | casein kinase 1-like protein HD16 OS=Nelumbo nucifera OX=4432 GN=LOC104597586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology