Basic Information
Locus ID:
gene.Cymno03g10720
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
metal tolerance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 25189924 | 25195018 | + | gene.Cymno03g10720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 46,677.08 Da | 42.60 | 108.35 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 319 | 394 | 5.2E-12 | IPR027470 |
| Pfam | PF01545 | Cation efflux family | 121 | 314 | 1.6E-26 | IPR002524 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 317 | 394 | 3.01E-15 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 114 | 315 | 6.02E-39 | IPR027469 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 119 | 313 | 8.6E-39 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 316 | 395 | 1.1E-15 | IPR036837 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 119 | 394 | 6.5E-31 | IPR002524 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58060.1 | Cation efflux family protein. | 0 |
| RefSeq | XP_010936997.1 | metal tolerance protein 4 isoform X1 [Elaeis guineensis] | 0 |
| Q10PP8 | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MTP4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A834ZC02 | ZT_dimer domain-containing protein OS=Tetracentron sinense OX=13715 GN=HHK36_012039 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology