Basic Information
Locus ID:
gene.Cymno03g10400
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 24945396 | 24948548 | - | gene.Cymno03g10400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 84,778.23 Da | 54.68 | 75.95 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 16 | 146 | 3.95799E-49 | - |
| CDD | cd14066 | STKc_IRAK | 434 | 694 | 4.66794E-87 | - |
| Pfam | PF00069 | Protein kinase domain | 429 | 681 | 1.5E-40 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 16 | 143 | 5.9E-10 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 408 | 683 | 3.78E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 16 | 144 | 5.19E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 406 | 500 | 1.4E-23 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 4 | 143 | 2.1E-12 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 501 | 703 | 6.7E-49 | - |
| SMART | SM00220 | serkin_6 | 428 | 691 | 1.4E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 428 | 691 | 36.47068 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 546 | 558 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 740 | 759 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 741 | 759 | - | - |
| Coils | Coil | Coil | 368 | 388 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31230.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_010252203.1 | PREDICTED: U-box domain-containing protein 35-like isoform X2 [Nelumbo nucifera] | 0 |
| Q9FKG5 | U-box domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=PUB51 PE=2 SV=2 | 0 | |
| TrEMBL | A0A822Z1V8 | Protein kinase domain-containing protein OS=Nelumbo nucifera OX=4432 GN=HUJ06_013079 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology