Basic Information
Locus ID:
gene.Cymno03g06670
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 7278432 | 7281738 | + | gene.Cymno03g06670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 111,464.08 Da | 38.37 | 97.19 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 500 | 560 | 7.7E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 706 | 923 | 1.1E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 65 | 5.2E-10 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 251 | 589 | 2.04E-68 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 298 | 2.07E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 696 | 988 | 6.42E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 704 | 788 | 5.6E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 789 | 1014 | 4.6E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 250 | 351 | 2.8E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 140 | 9.6E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 249 | 3.1E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 358 | 624 | 1.5E-77 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 91 | 114 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 283 | 307 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 115 | 139 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 331 | 355 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 547 | 571 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 427 | 451 | 140.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 704 | 988 | 1.4E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 452 | 475 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 187 | 211 | 90.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 704 | 1012 | 37.785141 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 710 | 734 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 838 | 850 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 990 | 1022 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 993 | 1009 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_039138587.1 | LOW QUALITY PROTEIN: MDIS1-interacting receptor like kinase 1-like [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9R3B8 | MDIS1-interacting receptor like kinase 1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105043178 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology