Basic Information
Locus ID:
gene.Cymno03g02550
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 1918924 | 1923986 | - | gene.Cymno03g02550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 65,137.89 Da | 46.25 | 86.07 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 122 | 384 | 1.52141E-126 | - |
| Pfam | PF00069 | Protein kinase domain | 123 | 385 | 2.9E-72 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 121 | 430 | 3.91E-82 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 415 | 570 | 3.5E-18 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 213 | 398 | 2.5E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 116 | 212 | 4.3E-24 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 404 | 567 | 9.3E-19 | - |
| SMART | SM00220 | serkin_6 | 123 | 385 | 2.6E-98 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 427 | 462 | 8.54379 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 123 | 385 | 50.590546 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 129 | 155 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 247 | 259 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 44 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_008798377.1 | calcium/calmodulin-dependent serine/threonine-protein kinase 1-like [Phoenix dactylifera] | 0 |
| O80673 | CDPK-related kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CFX4 | calcium/calmodulin-dependent serine/threonine-protein kinase 1-like OS=Phoenix dactylifera OX=42345 GN=LOC103713280 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology