Basic Information
Locus ID:
gene.Cymno03g00080
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 110371 | 113772 | + | gene.Cymno03g00080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.32 | 83,467.05 Da | 43.22 | 82.91 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 488 | 762 | 1.477E-87 | - |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 191 | 217 | 9.5E-5 | - |
| Pfam | PF00069 | Protein kinase domain | 485 | 755 | 5.4E-43 | IPR000719 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 63 | 295 | 3.14E-23 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 459 | 760 | 4.05E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 445 | 562 | 2.9E-34 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 187 | 339 | 1.2E-17 | IPR009091 |
| Gene3D | G3DSA:2.130.10.30 | - | 26 | 186 | 5.2E-9 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 563 | 772 | 4.1E-48 | - |
| SMART | SM00220 | serkin_6 | 482 | 765 | 6.0E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 482 | 765 | 36.216267 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 609 | 621 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 488 | 510 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 428 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 428 | 456 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_010920862.1 | putative serine/threonine-protein kinase-like protein CCR3 [Elaeis guineensis] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9PCJ0 | Putative Kinase OS=Zostera marina OX=29655 GN=ZOSMA_28G00270 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology