Basic Information
Locus ID:
gene.Cymno02g16850
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 26256858 | 26261035 | + | gene.Cymno02g16850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.82 | 140,430.09 Da | 41.49 | 82.08 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 647 | 895 | 2.50713E-127 | - |
| Pfam | PF04548 | AIG1 family | 678 | 828 | 1.0E-19 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1040 | 1304 | 1.2E-120 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 664 | 810 | 2.35E-17 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 650 | 899 | 2.6E-56 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 560 | 1309 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 675 | 905 | 28.219381 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 486 | 510 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 429 | 451 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 318 | - | - |
| Coils | Coil | Coil | 997 | 1017 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_038986708.1 | translocase of chloroplast 101, chloroplastic-like [Phoenix dactylifera] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PF83 | Translocase of chloroplast OS=Zostera marina OX=29655 GN=ZOSMA_261G00240 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology