Basic Information
Locus ID:
gene.Cymno02g14570
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Serine threonine-protein kinase ATM-like isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 23951833 | 23953920 | - | gene.Cymno02g14570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 75,432.54 Da | 42.54 | 65.38 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 10 | 99 | 1.34184E-20 | - |
| Pfam | PF00855 | PWWP domain | 11 | 99 | 3.0E-15 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 3 | 115 | 1.99E-23 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 2 | 109 | 2.9E-21 | - |
| SMART | SM00293 | PWWP_4 | 10 | 74 | 2.4E-8 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 12 | 76 | 14.24793 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 635 | 657 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 673 | 695 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 533 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 556 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 305 | - | - |
| Coils | Coil | Coil | 658 | 678 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40340.2 | - | 0 |
| RefSeq | XP_010936710.1 | uncharacterized protein LOC105056271 [Elaeis guineensis] | 0 |
| Q9FNE4 | PWWP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PDP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9S2W3 | uncharacterized protein LOC105056271 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105056271 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology