Basic Information
Locus ID:
gene.Cymno02g12870
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
BTB And C-terminal Kelch
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 22359285 | 22362506 | - | gene.Cymno02g12870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.12 | 65,466.29 Da | 47.52 | 83.88 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 167 | 248 | 5.37317E-11 | - |
| Pfam | PF00651 | BTB/POZ domain | 166 | 262 | 2.5E-14 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 286 | 380 | 2.8E-6 | IPR011705 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 460 | 573 | 1.08E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 167 | 262 | 3.92E-11 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 144 | 298 | 9.8E-15 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 299 | 402 | 1.9E-9 | - |
| SMART | SM00225 | BTB_4 | 167 | 265 | 3.3E-10 | IPR000210 |
| SMART | SM00875 | BACK_2 | 280 | 382 | 0.0078 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 165 | 234 | 11.977923 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_010925791.1 | BTB/POZ domain-containing protein POB1 isoform X2 [Elaeis guineensis] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A843V983 | BTB domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_025077 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology