Basic Information
Locus ID:
gene.Cymno02g12860
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 22343504 | 22357049 | - | gene.Cymno02g12860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 60,869.36 Da | 44.05 | 76.19 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 125 | 207 | 4.84874E-15 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 245 | 339 | 5.5E-11 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 124 | 221 | 3.1E-16 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 419 | 537 | 8.5E-9 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 131 | 221 | 6.98E-14 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 409 | 534 | 5.1E-5 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 85 | 258 | 1.0E-18 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 259 | 361 | 7.2E-15 | - |
| SMART | SM00875 | BACK_2 | 238 | 341 | 6.4E-10 | IPR011705 |
| SMART | SM00225 | BTB_4 | 126 | 224 | 1.2E-9 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 124 | 193 | 14.294308 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_039116314.1 | BTB/POZ domain-containing protein POB1 [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A843V983 | BTB domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_025077 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology