Basic Information
Locus ID:
gene.Cymno02g10800
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Translocase of chloroplast
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 11286057 | 11289497 | + | gene.Cymno02g10800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 125,265.20 Da | 44.61 | 78.83 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 487 | 733 | 2.68396E-126 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 873 | 1135 | 6.9E-119 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 516 | 674 | 1.4E-28 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 508 | 666 | 2.06E-19 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 486 | 736 | 1.2E-56 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 392 | 1139 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 513 | 742 | 32.817429 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 349 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 766 | 791 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 236 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 198 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 774 | 791 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_039137932.1 | LOW QUALITY PROTEIN: translocase of chloroplast 120, chloroplastic-like [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7I8KQS4 | AIG1-type G domain-containing protein OS=Spirodela intermedia OX=51605 GN=SI8410_07010326 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology