Basic Information
Locus ID:
gene.Cymno02g09510
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 7411001 | 7435614 | + | gene.Cymno02g09510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 84,882.21 Da | 46.66 | 77.67 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 25 | 178 | 2.9262E-43 | - |
| Pfam | PF00069 | Protein kinase domain | 475 | 723 | 9.9E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 445 | 724 | 1.09E-69 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 18 | 150 | 1.2E-7 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 543 | 743 | 5.4E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 449 | 542 | 6.9E-27 | - |
| SMART | SM00220 | serkin_6 | 470 | 736 | 2.0E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 470 | 745 | 35.396496 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 588 | 600 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 476 | 497 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 229 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 229 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| Coils | Coil | Coil | 364 | 405 | - | - |
| Coils | Coil | Coil | 319 | 349 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_008778858.2 | U-box domain-containing protein 33-like isoform X1 [Phoenix dactylifera] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B7BJW7 | U-box domain-containing protein 33-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103698606 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology