Basic Information
Locus ID:
gene.Cymno02g06210
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 4627381 | 4631978 | + | gene.Cymno02g06210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 89,388.75 Da | 45.55 | 81.57 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 92 | 288 | 2.06051E-98 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 106 | 265 | 6.7E-11 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 270 | 768 | 7.1E-195 | IPR001404 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 621 | 742 | 2.22E-33 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 341 | 599 | 1.52E-89 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 83 | 298 | 1.96E-60 | IPR036890 |
| Gene3D | G3DSA:3.30.565.10 | - | 69 | 312 | 5.5E-89 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 512 | 599 | 1.3E-32 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 600 | 746 | 1.9E-52 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 339 | 511 | 1.2E-73 | - |
| SMART | SM00387 | HKATPase_4 | 105 | 267 | 0.0012 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 57 | 786 | 2.6E-239 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 103 | 112 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 104 | 126 | 4.4E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 83 | 103 | 4.4E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 200 | 222 | 4.4E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 274 | 292 | 4.4E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 171 | 188 | 4.4E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 255 | 272 | 4.4E-62 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 153 | 170 | 4.4E-62 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 72 | 743 | 26.011255 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 750 | 791 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 776 | 791 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_008788962.1 | heat shock protein 90-5, chloroplastic-like [Phoenix dactylifera] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7C0A8 | heat shock protein 90-5, chloroplastic-like OS=Phoenix dactylifera OX=42345 GN=LOC103706592 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology