Basic Information
Locus ID:
gene.Cymno02g02250
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 1824897 | 1830122 | - | gene.Cymno02g02250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 68,458.61 Da | 47.38 | 84.92 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 157 | 419 | 3.44287E-130 | - |
| Pfam | PF00069 | Protein kinase domain | 158 | 420 | 7.6E-71 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 156 | 459 | 5.8E-86 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 452 | 601 | 4.37E-13 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 445 | 599 | 2.5E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 247 | 432 | 1.6E-61 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 438 | 529 | 2.5E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 151 | 246 | 3.4E-23 | - |
| SMART | SM00220 | serkin_6 | 158 | 420 | 1.2E-102 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 158 | 420 | 51.537525 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 282 | 294 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 164 | 190 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 77 | 96 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_018673775.1 | PREDICTED: CDPK-related kinase 5-like [Musa acuminata subsp. malaccensis] | 0 |
| P53681 | CDPK-related protein kinase OS=Daucus carota OX=4039 GN=CRK PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9P0J8 | Putative Calcium-dependent protein kinase OS=Zostera marina OX=29655 GN=ZOSMA_4G00090 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology