Basic Information
Locus ID:
gene.Cymno02g01370
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 1055600 | 1056826 | - | gene.Cymno02g01370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.25 | 44,611.41 Da | 48.87 | 101.40 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 164 | 178 | 0.93 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 46 | 85 | 3.9E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 78 | 384 | 1.51E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 46 | 205 | 4.6E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 206 | 395 | 2.2E-27 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_021902019.1 | probably inactive leucine-rich repeat receptor-like protein kinase IMK2 [Carica papaya] | 0 |
| TrEMBL | A0A6A1URY3 | LRR receptor-like serine/threonine-protein kinase ERL2 OS=Morella rubra OX=262757 GN=CJ030_MR8G017933 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology