Basic Information
Locus ID:
gene.Cymno02g00160
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Type I inositol-1,4,5-trisphosphate 5-phosphatase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 175422 | 185849 | - | gene.Cymno02g00160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 129,143.56 Da | 49.78 | 73.61 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 636 | 981 | 1.48001E-103 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 641 | 972 | 4.3E-14 | IPR005135 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 251 | 622 | 7.87E-23 | IPR036322 |
| SUPERFAMILY | SSF56219 | DNase I-like | 613 | 1003 | 1.73E-57 | IPR036691 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 616 | 1013 | 1.9E-99 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 198 | 615 | 7.0E-18 | IPR015943 |
| SMART | SM00320 | WD40_4 | 313 | 351 | 0.071 | IPR001680 |
| SMART | SM00128 | i5p_5 | 634 | 987 | 2.8E-95 | IPR000300 |
| SMART | SM00320 | WD40_4 | 492 | 530 | 290.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 241 | 279 | 5.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 532 | 569 | 4.8 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 53 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_008800982.2 | type II inositol polyphosphate 5-phosphatase 15-like [Phoenix dactylifera] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1D1XXI4 | Type II inositol 1,4,5-trisphosphate 5-phosphatase FRA3 (Fragment) OS=Anthurium amnicola OX=1678845 GN=FRA3_2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology