Basic Information
Locus ID:
gene.Cymno01g15590
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 28699088 | 28701686 | + | gene.Cymno01g15590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 59,148.35 Da | 42.73 | 83.67 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 215 | 424 | 1.6E-38 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 190 | 485 | 1.16E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 193 | 292 | 3.8E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 294 | 499 | 2.7E-56 | - |
| SMART | SM00220 | serkin_6 | 214 | 492 | 1.2E-17 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 214 | 492 | 33.544941 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 220 | 247 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 339 | 351 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 183 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 81 | - | - |
| Coils | Coil | Coil | 57 | 77 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65530.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020102446.1 | receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X2 [Ananas comosus] | 0 |
| Q8H1D6 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1XIB9 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Anthurium amnicola OX=1678845 GN=RBK1_2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology