Basic Information
Locus ID:
gene.Cymno01g15360
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 28587904 | 28601471 | + | gene.Cymno01g15360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.31 | 316,839.25 Da | 44.20 | 90.24 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 288 | 618 | 4.3E-109 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 282 | 653 | 7.82E-118 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 278 | 631 | 6.9E-134 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 280 | 627 | 4.5E-155 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 282 | 619 | 117.817062 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 515 | 526 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 569 | 590 | 5.6E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 516 | 534 | 5.6E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 354 | 375 | 5.6E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 483 | 500 | 5.6E-40 | IPR001752 |
| Coils | Coil | Coil | 2353 | 2408 | - | - |
| Coils | Coil | Coil | 1121 | 1141 | - | - |
| Coils | Coil | Coil | 2118 | 2138 | - | - |
| Coils | Coil | Coil | 1000 | 1048 | - | - |
| Coils | Coil | Coil | 1322 | 1349 | - | - |
| Coils | Coil | Coil | 1192 | 1212 | - | - |
| Coils | Coil | Coil | 2223 | 2243 | - | - |
| Coils | Coil | Coil | 881 | 915 | - | - |
| Coils | Coil | Coil | 2531 | 2565 | - | - |
| Coils | Coil | Coil | 626 | 653 | - | - |
| Coils | Coil | Coil | 2442 | 2462 | - | - |
| Coils | Coil | Coil | 2474 | 2494 | - | - |
| Coils | Coil | Coil | 1406 | 1433 | - | - |
| Coils | Coil | Coil | 2083 | 2103 | - | - |
| Coils | Coil | Coil | 832 | 852 | - | - |
| Coils | Coil | Coil | 1262 | 1282 | - | - |
| Coils | Coil | Coil | 1647 | 1667 | - | - |
| Coils | Coil | Coil | 723 | 750 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_017698849.2 | kinesin-like protein KIN-12F [Phoenix dactylifera] | 0 |
| B9GE13 | Kinesin-like protein KIN-12F OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12F PE=3 SV=1 | 0 | |
| TrEMBL | A0A8B7MU96 | kinesin-like protein KIN-12F OS=Phoenix dactylifera OX=42345 GN=LOC103709188 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology