Basic Information
Locus ID:
gene.Cymno01g12950
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 26903786 | 26907219 | - | gene.Cymno01g12950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.48 | 53,886.06 Da | 41.21 | 76.49 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 136 | 413 | 5.36324E-92 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 134 | 410 | 4.3E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 116 | 427 | 8.9E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 110 | 215 | 5.5E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 216 | 430 | 3.8E-63 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 130 | 414 | 38.929996 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 136 | 168 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 259 | 271 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 447 | 482 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15080.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020098623.1 | probable serine/threonine-protein kinase PIX7 [Ananas comosus] | 0 |
| Q9LFP7 | Serine/threonine-protein kinase PBL34 OS=Arabidopsis thaliana OX=3702 GN=PBL34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P5FYQ5 | probable serine/threonine-protein kinase PIX7 OS=Ananas comosus OX=4615 GN=LOC109717311 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology