Basic Information
Locus ID:
gene.Cymno01g11220
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Phosphatidylinositol 3- and 4-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 25697984 | 25705576 | - | gene.Cymno01g11220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 110,630.78 Da | 41.91 | 83.78 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16571 | RING-HC_SIAHs | 61 | 99 | 5.22591E-17 | - |
| CDD | cd17039 | Ubl_ubiquitin_like | 536 | 603 | 4.41899E-8 | - |
| CDD | cd03829 | Sina | 177 | 305 | 6.82743E-63 | - |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 686 | 939 | 1.6E-54 | IPR000403 |
| Pfam | PF03145 | Seven in absentia protein family | 105 | 304 | 4.4E-79 | IPR018121 |
| Pfam | PF00240 | Ubiquitin family | 536 | 604 | 1.1E-7 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 468 | 530 | 2.1E-10 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 529 | 604 | 1.52E-12 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 453 | 531 | 2.03E-13 | IPR029071 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 827 | 985 | 1.22E-6 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 57 | 103 | 7.66E-5 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 116 | 308 | 2.88E-48 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 453 | 535 | 4.0E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 116 | 171 | 1.4E-16 | IPR013083 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 176 | 304 | 2.1E-37 | IPR008974 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 39 | 115 | 3.2E-6 | IPR013083 |
| Gene3D | G3DSA:3.10.20.90 | - | 536 | 609 | 3.8E-10 | - |
| SMART | SM00213 | ubq_7 | 457 | 529 | 4.7E-4 | IPR000626 |
| SMART | SM00213 | ubq_7 | 534 | 605 | 1.4E-4 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 534 | 604 | 12.96646 | IPR000626 |
| ProSiteProfiles | PS51081 | Zinc finger SIAH-type profile. | 116 | 176 | 14.245239 | IPR013010 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 457 | 533 | 12.792257 | IPR000626 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 63 | 99 | 9.464913 | IPR001841 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46500.1 | phosphoinositide 4-kinase gamma 4. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. | 0 |
| RefSeq | XP_039125097.1 | phosphatidylinositol 4-kinase gamma 4-like [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9ZPY9 | Phosphatidylinositol 4-kinase gamma 4 OS=Arabidopsis thaliana OX=3702 GN=PI4KG4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9Q4J5 | 1-phosphatidylinositol 4-kinase OS=Zostera marina OX=29655 GN=ZOSMA_105G00150 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology