Basic Information
Locus ID:
gene.Cymno01g10430
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 25113084 | 25117974 | - | gene.Cymno01g10430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 69,695.05 Da | 45.53 | 99.34 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 6.7E-12 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 303 | 573 | 8.6E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 276 | 574 | 2.0E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 189 | 1.21E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 377 | 591 | 3.3E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 269 | 376 | 9.3E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 216 | 1.1E-51 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 166 | 189 | 13.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 300 | 573 | 1.2E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 118 | 142 | 7.6 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 120 | 143 | 7.588744 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 300 | 579 | 36.301071 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 168 | 189 | 7.065096 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 306 | 328 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 423 | 435 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_010910388.1 | protein NSP-INTERACTING KINASE 3 [Elaeis guineensis] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9QJ34 | protein NSP-INTERACTING KINASE 3 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105036317 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology