Basic Information
Locus ID:
gene.Cymno01g08780
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 23456128 | 23460589 | + | gene.Cymno01g08780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 84,988.78 Da | 49.96 | 77.89 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 21 | 158 | 3.45941E-47 | - |
| Pfam | PF00069 | Protein kinase domain | 447 | 700 | 3.2E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 428 | 704 | 6.29E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 22 | 155 | 4.6E-6 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 13 | 155 | 1.7E-6 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 519 | 724 | 1.7E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 413 | 518 | 1.9E-24 | - |
| SMART | SM00220 | serkin_6 | 446 | 712 | 2.0E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 446 | 709 | 36.258671 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 564 | 576 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 729 | 758 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 729 | 752 | - | - |
| Coils | Coil | Coil | 372 | 395 | - | - |
| Coils | Coil | Coil | 397 | 417 | - | - |
| Coils | Coil | Coil | 312 | 332 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31230.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_042492007.1 | U-box domain-containing protein 35-like isoform X2 [Macadamia integrifolia] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A822Z1V8 | Protein kinase domain-containing protein OS=Nelumbo nucifera OX=4432 GN=HUJ06_013079 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology