Basic Information
Locus ID:
gene.Cymno01g08730
Species & Taxonomic ID:
Cymodocea nodosa & 55448
Genome Assembly:
GCA_036874045.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr01 | 23420117 | 23428166 | + | gene.Cymno01g08730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 76,365.02 Da | 48.48 | 89.96 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 145 | 203 | 2.1E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 71 | 3.4E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 403 | 666 | 1.7E-37 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 241 | 1.47E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 381 | 666 | 2.6E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 477 | 683 | 8.8E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 362 | 476 | 9.0E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 284 | 9.0E-49 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 400 | 675 | 34.20924 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 678 | 697 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78980.1 | STRUBBELIG-receptor family 5. | 0 |
| RefSeq | XP_020109064.1 | protein STRUBBELIG-RECEPTOR FAMILY 5 isoform X1 [Ananas comosus] | 0 |
| Q6R2K1 | Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P5GMD9 | protein STRUBBELIG-RECEPTOR FAMILY 5 isoform X1 OS=Ananas comosus OX=4615 GN=LOC109724602 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology